A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report generated on 2024-12-22, 16:22 PST based on data in:
/analyzed_data/Julin/sequencing/Julin-FERN/bams/Aligned.out.sam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA12-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA14-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BA19-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BD5-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF16-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-S5_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-WYS_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/BF5-gam_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-S5-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-WYS-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Cross-gam-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RESUB-WT-WYS-4_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-S5-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-WYS-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/RNAi-gam-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-S5-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-WYS-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-male-gam-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-1_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-2_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_P_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Aligned.out.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Aligned.out.sorted.bam/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Aligned.out.sorted.bam.bai/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Log.final.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Log.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_Log.progress.out/analyzed_data/Julin/sequencing/Julin-FERN/bams/WT-mature-herm-3_U_SJ.out.tab/analyzed_data/Julin/sequencing/Julin-FERN/bams/_STARtmp
General Statistics
| Sample Name | Total reads | Aligned | Aligned | Uniq aligned | Uniq aligned | Multimapped |
|---|---|---|---|---|---|---|
| BA12-S5_P | 18.6M | 17.3M | 92.6% | 15.9M | 85.1% | 1.4M |
| BA12-S5_U | 3.5M | 3.3M | 93.0% | 3.0M | 83.8% | 0.3M |
| BA12-WYS_P | 24.0M | 21.8M | 90.8% | 20.5M | 85.5% | 1.3M |
| BA12-WYS_U | 4.0M | 3.6M | 91.1% | 3.4M | 84.7% | 0.3M |
| BA12-gam_P | 20.5M | 18.0M | 87.9% | 15.8M | 77.3% | 2.2M |
| BA12-gam_U | 3.8M | 3.3M | 86.7% | 2.9M | 76.0% | 0.4M |
| BA14-S5_P | 24.1M | 20.2M | 83.9% | 18.2M | 75.7% | 2.0M |
| BA14-S5_U | 4.3M | 3.6M | 84.9% | 3.2M | 75.7% | 0.4M |
| BA14-WYS_P | 19.8M | 19.0M | 96.0% | 18.3M | 92.3% | 0.7M |
| BA14-WYS_U | 3.1M | 3.0M | 96.5% | 2.8M | 91.3% | 0.2M |
| BA14-gam_P | 22.1M | 16.7M | 75.9% | 13.9M | 62.9% | 2.9M |
| BA14-gam_U | 4.4M | 3.3M | 74.3% | 2.7M | 62.1% | 0.5M |
| BA19-S5_P | 25.1M | 23.1M | 92.0% | 22.0M | 87.8% | 1.1M |
| BA19-S5_U | 3.3M | 3.0M | 92.5% | 2.9M | 86.7% | 0.2M |
| BA19-WYS_P | 18.9M | 16.4M | 86.4% | 14.9M | 78.8% | 1.4M |
| BA19-WYS_U | 3.9M | 3.4M | 86.4% | 3.1M | 78.0% | 0.3M |
| BA19-gam_P | 22.6M | 12.0M | 53.0% | 8.5M | 37.7% | 3.5M |
| BA19-gam_U | 4.9M | 2.4M | 48.1% | 1.7M | 34.0% | 0.7M |
| BD5-S5_P | 16.2M | 15.1M | 93.6% | 14.1M | 87.2% | 1.0M |
| BD5-S5_U | 3.0M | 2.8M | 94.0% | 2.5M | 86.0% | 0.2M |
| BD5-WYS_P | 19.1M | 16.6M | 86.7% | 15.4M | 80.5% | 1.2M |
| BD5-WYS_U | 3.8M | 3.3M | 87.3% | 3.1M | 79.9% | 0.3M |
| BD5-gam_P | 24.5M | 16.9M | 69.1% | 11.1M | 45.2% | 5.9M |
| BD5-gam_U | 4.5M | 2.7M | 60.2% | 1.8M | 40.7% | 0.9M |
| BF5-S5_P | 17.1M | 15.3M | 89.3% | 13.7M | 79.7% | 1.6M |
| BF5-S5_U | 3.2M | 2.8M | 89.4% | 2.5M | 78.5% | 0.3M |
| BF5-WYS_P | 20.0M | 18.2M | 90.9% | 16.7M | 83.5% | 1.5M |
| BF5-WYS_U | 3.6M | 3.2M | 90.7% | 2.9M | 82.4% | 0.3M |
| BF5-gam_P | 21.2M | 17.4M | 82.2% | 15.6M | 73.9% | 1.8M |
| BF5-gam_U | 4.9M | 4.0M | 82.1% | 3.6M | 72.8% | 0.5M |
| BF16-S5_P | 27.0M | 21.4M | 79.3% | 17.7M | 65.7% | 3.7M |
| BF16-S5_U | 4.8M | 3.5M | 74.2% | 2.9M | 61.3% | 0.6M |
| BF16-WYS_P | 20.4M | 18.6M | 91.2% | 17.6M | 86.6% | 0.9M |
| BF16-WYS_U | 3.7M | 3.4M | 91.8% | 3.2M | 85.8% | 0.2M |
| BF16-gam_P | 25.5M | 17.6M | 69.1% | 11.4M | 44.7% | 6.2M |
| BF16-gam_U | 4.8M | 2.9M | 60.0% | 1.9M | 40.0% | 1.0M |
| Cross-S5-1_P | 21.9M | 19.4M | 88.6% | 17.7M | 80.9% | 1.7M |
| Cross-S5-1_U | 4.0M | 3.6M | 88.7% | 3.2M | 80.0% | 0.3M |
| Cross-S5-2_P | 23.1M | 21.3M | 92.1% | 19.7M | 85.3% | 1.6M |
| Cross-S5-2_U | 4.0M | 3.7M | 92.2% | 3.4M | 84.2% | 0.3M |
| Cross-S5-3_P | 19.0M | 15.3M | 80.3% | 13.7M | 72.1% | 1.6M |
| Cross-S5-3_U | 3.7M | 2.9M | 80.5% | 2.6M | 71.6% | 0.3M |
| Cross-WYS-1_P | 20.0M | 17.6M | 87.9% | 16.4M | 81.9% | 1.2M |
| Cross-WYS-1_U | 4.0M | 3.5M | 88.5% | 3.2M | 81.4% | 0.3M |
| Cross-WYS-2_P | 19.9M | 18.2M | 91.2% | 17.2M | 86.2% | 1.0M |
| Cross-WYS-2_U | 3.1M | 2.8M | 91.6% | 2.6M | 85.5% | 0.2M |
| Cross-WYS-3_P | 21.2M | 18.7M | 88.3% | 17.7M | 83.8% | 1.0M |
| Cross-WYS-3_U | 3.8M | 3.4M | 89.0% | 3.2M | 83.2% | 0.2M |
| Cross-gam-1_P | 18.5M | 16.3M | 88.2% | 14.5M | 78.5% | 1.8M |
| Cross-gam-1_U | 3.4M | 3.0M | 87.4% | 2.6M | 76.9% | 0.4M |
| Cross-gam-2_P | 18.8M | 17.9M | 94.9% | 16.5M | 87.6% | 1.4M |
| Cross-gam-2_U | 3.6M | 3.4M | 94.9% | 3.1M | 86.1% | 0.3M |
| Cross-gam-3_P | 17.0M | 16.3M | 95.8% | 15.3M | 90.0% | 1.0M |
| Cross-gam-3_U | 2.5M | 2.4M | 95.9% | 2.2M | 88.3% | 0.2M |
| RESUB-WT-WYS-4_P | 20.8M | 19.5M | 93.8% | 18.4M | 88.8% | 1.0M |
| RESUB-WT-WYS-4_U | 3.4M | 3.3M | 94.4% | 3.0M | 87.8% | 0.2M |
| RNAi-S5-1_P | 17.0M | 16.4M | 96.8% | 15.4M | 90.8% | 1.0M |
| RNAi-S5-1_U | 3.4M | 3.3M | 97.8% | 3.0M | 89.5% | 0.3M |
| RNAi-S5-2_P | 21.7M | 18.5M | 85.2% | 16.3M | 75.2% | 2.2M |
| RNAi-S5-2_U | 4.1M | 3.6M | 86.8% | 3.0M | 73.9% | 0.5M |
| RNAi-S5-3_P | 19.7M | 15.8M | 80.0% | 14.2M | 72.2% | 1.6M |
| RNAi-S5-3_U | 3.3M | 2.7M | 81.9% | 2.4M | 72.0% | 0.3M |
| RNAi-WYS-1_P | 19.6M | 16.7M | 85.3% | 15.7M | 80.3% | 1.0M |
| RNAi-WYS-1_U | 3.1M | 2.7M | 85.9% | 2.5M | 79.8% | 0.2M |
| RNAi-WYS-2_P | 20.1M | 16.4M | 81.5% | 15.3M | 76.2% | 1.1M |
| RNAi-WYS-2_U | 3.4M | 2.8M | 81.8% | 2.5M | 75.6% | 0.2M |
| RNAi-WYS-3_P | 24.7M | 20.9M | 84.5% | 19.4M | 78.6% | 1.5M |
| RNAi-WYS-3_U | 4.8M | 4.1M | 85.2% | 3.8M | 78.5% | 0.3M |
| RNAi-gam-1_P | 18.2M | 15.5M | 85.4% | 14.8M | 81.4% | 0.7M |
| RNAi-gam-1_U | 3.2M | 2.8M | 86.4% | 2.6M | 81.3% | 0.2M |
| RNAi-gam-2_P | 20.6M | 15.9M | 76.8% | 14.9M | 72.0% | 1.0M |
| RNAi-gam-2_U | 3.8M | 2.9M | 77.5% | 2.7M | 71.9% | 0.2M |
| RNAi-gam-3_P | 23.6M | 22.5M | 95.2% | 21.6M | 91.3% | 0.9M |
| RNAi-gam-3_U | 4.1M | 4.0M | 96.2% | 3.7M | 91.0% | 0.2M |
| WT-S5-1_P | 19.1M | 17.9M | 93.9% | 16.9M | 88.9% | 1.0M |
| WT-S5-1_U | 4.0M | 3.8M | 94.8% | 3.6M | 88.0% | 0.3M |
| WT-S5-2_P | 21.4M | 19.9M | 93.2% | 18.7M | 87.4% | 1.2M |
| WT-S5-2_U | 4.0M | 3.8M | 93.7% | 3.5M | 86.5% | 0.3M |
| WT-S5-3_P | 20.7M | 18.1M | 87.5% | 16.9M | 81.6% | 1.2M |
| WT-S5-3_U | 3.2M | 2.8M | 87.3% | 2.5M | 79.8% | 0.2M |
| WT-WYS-2_P | 18.9M | 18.2M | 96.3% | 17.5M | 92.9% | 0.7M |
| WT-WYS-2_U | 3.5M | 3.4M | 97.3% | 3.2M | 92.3% | 0.2M |
| WT-WYS-3_P | 19.2M | 18.4M | 96.0% | 17.7M | 92.4% | 0.7M |
| WT-WYS-3_U | 3.4M | 3.3M | 96.8% | 3.1M | 91.6% | 0.2M |
| WT-male-gam-1_P | 20.3M | 19.4M | 95.5% | 18.7M | 92.2% | 0.7M |
| WT-male-gam-1_U | 3.5M | 3.4M | 96.7% | 3.2M | 92.0% | 0.2M |
| WT-male-gam-2_P | 22.5M | 21.5M | 95.5% | 20.8M | 92.0% | 0.8M |
| WT-male-gam-2_U | 3.2M | 3.1M | 96.2% | 3.0M | 91.4% | 0.2M |
| WT-male-gam-3_P | 23.8M | 22.7M | 95.3% | 21.9M | 91.7% | 0.8M |
| WT-male-gam-3_U | 3.8M | 3.6M | 96.1% | 3.5M | 91.2% | 0.2M |
| WT-mature-herm-1_P | 22.0M | 15.2M | 68.9% | 11.0M | 50.1% | 4.1M |
| WT-mature-herm-1_U | 4.1M | 2.5M | 61.7% | 1.9M | 46.4% | 0.6M |
| WT-mature-herm-2_P | 19.4M | 14.3M | 73.4% | 12.7M | 65.3% | 1.6M |
| WT-mature-herm-2_U | 3.1M | 2.3M | 73.3% | 2.0M | 65.1% | 0.3M |
| WT-mature-herm-3_P | 23.7M | 15.7M | 66.2% | 10.7M | 45.2% | 5.0M |
| WT-mature-herm-3_U | 5.0M | 2.9M | 58.3% | 2.1M | 41.8% | 0.8M |
STAR
Universal RNA-seq aligner.URL: https://github.com/alexdobin/STARDOI: 10.1093/bioinformatics/bts635
Summary Statistics
Summary statistics from the STAR alignment
| Sample Name | Total reads | Aligned | Aligned | Uniq aligned | Uniq aligned | Multimapped | Avg. read len | Avg. mapped len | Splices | Annotated splices | GT/AG splices | GC/AG splices | AT/AC splices | Non-canonical splices | Mismatch rate | Del rate | Del len | Ins rate | Ins len |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BA12-S5_P | 18.6M | 17.3M | 92.6% | 15.9M | 85.1% | 1.4M | 296.0bp | 295.2bp | 13.0M | 12.8M | 12.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA12-S5_U | 3.5M | 3.3M | 93.0% | 3.0M | 83.8% | 0.3M | 120.0bp | 120.4bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA12-WYS_P | 24.0M | 21.8M | 90.8% | 20.5M | 85.5% | 1.3M | 296.0bp | 295.0bp | 18.4M | 17.9M | 18.0M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA12-WYS_U | 4.0M | 3.6M | 91.1% | 3.4M | 84.7% | 0.3M | 121.0bp | 121.0bp | 1.2M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA12-gam_P | 20.5M | 18.0M | 87.9% | 15.8M | 77.3% | 2.2M | 295.0bp | 294.7bp | 12.3M | 12.0M | 12.1M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA12-gam_U | 3.8M | 3.3M | 86.7% | 2.9M | 76.0% | 0.4M | 120.0bp | 120.5bp | 0.8M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA14-S5_P | 24.1M | 20.2M | 83.9% | 18.2M | 75.7% | 2.0M | 296.0bp | 295.4bp | 14.1M | 13.7M | 13.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.3bp |
| BA14-S5_U | 4.3M | 3.6M | 84.9% | 3.2M | 75.7% | 0.4M | 121.0bp | 120.9bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA14-WYS_P | 19.8M | 19.0M | 96.0% | 18.3M | 92.3% | 0.7M | 295.0bp | 294.9bp | 15.8M | 15.5M | 15.5M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA14-WYS_U | 3.1M | 3.0M | 96.5% | 2.8M | 91.3% | 0.2M | 121.0bp | 121.4bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA14-gam_P | 22.1M | 16.7M | 75.9% | 13.9M | 62.9% | 2.9M | 296.0bp | 295.1bp | 10.0M | 9.8M | 9.9M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA14-gam_U | 4.4M | 3.3M | 74.3% | 2.7M | 62.1% | 0.5M | 119.0bp | 118.9bp | 0.7M | 0.7M | 0.7M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA19-S5_P | 25.1M | 23.1M | 92.0% | 22.0M | 87.8% | 1.1M | 296.0bp | 295.1bp | 19.7M | 19.2M | 19.3M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| BA19-S5_U | 3.3M | 3.0M | 92.5% | 2.9M | 86.7% | 0.2M | 121.0bp | 121.4bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| BA19-WYS_P | 18.9M | 16.4M | 86.4% | 14.9M | 78.8% | 1.4M | 296.0bp | 295.0bp | 13.4M | 13.1M | 13.2M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BA19-WYS_U | 3.9M | 3.4M | 86.4% | 3.1M | 78.0% | 0.3M | 119.0bp | 119.1bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.3bp |
| BA19-gam_P | 22.6M | 12.0M | 53.0% | 8.5M | 37.7% | 3.5M | 297.0bp | 295.8bp | 5.9M | 5.7M | 5.7M | 0.1M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.4bp |
| BA19-gam_U | 4.9M | 2.4M | 48.1% | 1.7M | 34.0% | 0.7M | 124.0bp | 124.1bp | 0.5M | 0.4M | 0.4M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.5bp |
| BD5-S5_P | 16.2M | 15.1M | 93.6% | 14.1M | 87.2% | 1.0M | 296.0bp | 295.7bp | 12.0M | 11.8M | 11.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BD5-S5_U | 3.0M | 2.8M | 94.0% | 2.5M | 86.0% | 0.2M | 118.0bp | 118.6bp | 0.8M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BD5-WYS_P | 19.1M | 16.6M | 86.7% | 15.4M | 80.5% | 1.2M | 296.0bp | 295.4bp | 13.2M | 12.9M | 13.0M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BD5-WYS_U | 3.8M | 3.3M | 87.3% | 3.1M | 79.9% | 0.3M | 120.0bp | 119.7bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BD5-gam_P | 24.5M | 16.9M | 69.1% | 11.1M | 45.2% | 5.9M | 296.0bp | 295.8bp | 7.9M | 7.7M | 7.8M | 0.1M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.4bp |
| BD5-gam_U | 4.5M | 2.7M | 60.2% | 1.8M | 40.7% | 0.9M | 123.0bp | 124.5bp | 0.5M | 0.5M | 0.5M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.6bp |
| BF5-S5_P | 17.1M | 15.3M | 89.3% | 13.7M | 79.7% | 1.6M | 296.0bp | 295.8bp | 11.4M | 11.2M | 11.2M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF5-S5_U | 3.2M | 2.8M | 89.4% | 2.5M | 78.5% | 0.3M | 119.0bp | 118.8bp | 0.8M | 0.7M | 0.8M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.3bp |
| BF5-WYS_P | 20.0M | 18.2M | 90.9% | 16.7M | 83.5% | 1.5M | 296.0bp | 294.9bp | 13.6M | 13.2M | 13.3M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF5-WYS_U | 3.6M | 3.2M | 90.7% | 2.9M | 82.4% | 0.3M | 121.0bp | 121.4bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.3bp |
| BF5-gam_P | 21.2M | 17.4M | 82.2% | 15.6M | 73.9% | 1.8M | 296.0bp | 295.4bp | 11.6M | 11.3M | 11.5M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF5-gam_U | 4.9M | 4.0M | 82.1% | 3.6M | 72.8% | 0.5M | 119.0bp | 119.4bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF16-S5_P | 27.0M | 21.4M | 79.3% | 17.7M | 65.7% | 3.7M | 297.0bp | 296.2bp | 15.4M | 15.1M | 15.2M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.4bp |
| BF16-S5_U | 4.8M | 3.5M | 74.2% | 2.9M | 61.3% | 0.6M | 125.0bp | 124.8bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.5bp | 0.0% | 1.4bp |
| BF16-WYS_P | 20.4M | 18.6M | 91.2% | 17.6M | 86.6% | 0.9M | 296.0bp | 295.4bp | 15.9M | 15.5M | 15.6M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF16-WYS_U | 3.7M | 3.4M | 91.8% | 3.2M | 85.8% | 0.2M | 120.0bp | 119.7bp | 1.1M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| BF16-gam_P | 25.5M | 17.6M | 69.1% | 11.4M | 44.7% | 6.2M | 296.0bp | 295.8bp | 7.8M | 7.5M | 7.6M | 0.1M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.6bp |
| BF16-gam_U | 4.8M | 2.9M | 60.0% | 1.9M | 40.0% | 1.0M | 123.0bp | 124.2bp | 0.5M | 0.5M | 0.5M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.8bp |
| Cross-S5-1_P | 21.9M | 19.4M | 88.6% | 17.7M | 80.9% | 1.7M | 296.0bp | 294.9bp | 14.9M | 14.5M | 14.7M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-S5-1_U | 4.0M | 3.6M | 88.7% | 3.2M | 80.0% | 0.3M | 120.0bp | 120.0bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-S5-2_P | 23.1M | 21.3M | 92.1% | 19.7M | 85.3% | 1.6M | 296.0bp | 295.1bp | 17.1M | 16.7M | 16.8M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-S5-2_U | 4.0M | 3.7M | 92.2% | 3.4M | 84.2% | 0.3M | 121.0bp | 121.1bp | 1.1M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-S5-3_P | 19.0M | 15.3M | 80.3% | 13.7M | 72.1% | 1.6M | 296.0bp | 295.2bp | 12.1M | 11.9M | 12.0M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-S5-3_U | 3.7M | 2.9M | 80.5% | 2.6M | 71.6% | 0.3M | 119.0bp | 119.5bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-1_P | 20.0M | 17.6M | 87.9% | 16.4M | 81.9% | 1.2M | 296.0bp | 295.2bp | 15.0M | 14.7M | 14.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-1_U | 4.0M | 3.5M | 88.5% | 3.2M | 81.4% | 0.3M | 119.0bp | 119.4bp | 1.1M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-2_P | 19.9M | 18.2M | 91.2% | 17.2M | 86.2% | 1.0M | 296.0bp | 295.4bp | 15.6M | 15.3M | 15.4M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-2_U | 3.1M | 2.8M | 91.6% | 2.6M | 85.5% | 0.2M | 120.0bp | 120.4bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-3_P | 21.2M | 18.7M | 88.3% | 17.7M | 83.8% | 1.0M | 296.0bp | 295.3bp | 16.9M | 16.5M | 16.6M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-WYS-3_U | 3.8M | 3.4M | 89.0% | 3.2M | 83.2% | 0.2M | 120.0bp | 119.8bp | 1.2M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-1_P | 18.5M | 16.3M | 88.2% | 14.5M | 78.5% | 1.8M | 296.0bp | 294.9bp | 12.6M | 12.3M | 12.4M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-1_U | 3.4M | 3.0M | 87.4% | 2.6M | 76.9% | 0.4M | 121.0bp | 121.2bp | 0.9M | 0.8M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-2_P | 18.8M | 17.9M | 94.9% | 16.5M | 87.6% | 1.4M | 296.0bp | 295.3bp | 15.0M | 14.8M | 14.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-2_U | 3.6M | 3.4M | 94.9% | 3.1M | 86.1% | 0.3M | 120.0bp | 120.2bp | 1.1M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-3_P | 17.0M | 16.3M | 95.8% | 15.3M | 90.0% | 1.0M | 295.0bp | 295.0bp | 14.1M | 13.8M | 13.8M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| Cross-gam-3_U | 2.5M | 2.4M | 95.9% | 2.2M | 88.3% | 0.2M | 121.0bp | 121.7bp | 0.8M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RESUB-WT-WYS-4_P | 20.8M | 19.5M | 93.8% | 18.4M | 88.8% | 1.0M | 296.0bp | 295.3bp | 16.5M | 16.2M | 16.2M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RESUB-WT-WYS-4_U | 3.4M | 3.3M | 94.4% | 3.0M | 87.8% | 0.2M | 120.0bp | 120.2bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-S5-1_P | 17.0M | 16.4M | 96.8% | 15.4M | 90.8% | 1.0M | 296.0bp | 294.9bp | 12.2M | 11.8M | 12.0M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-S5-1_U | 3.4M | 3.3M | 97.8% | 3.0M | 89.5% | 0.3M | 120.0bp | 119.8bp | 0.9M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-S5-2_P | 21.7M | 18.5M | 85.2% | 16.3M | 75.2% | 2.2M | 296.0bp | 295.2bp | 14.3M | 13.9M | 14.1M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-S5-2_U | 4.1M | 3.6M | 86.8% | 3.0M | 73.9% | 0.5M | 120.0bp | 120.1bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| RNAi-S5-3_P | 19.7M | 15.8M | 80.0% | 14.2M | 72.2% | 1.6M | 296.0bp | 295.8bp | 11.7M | 11.4M | 11.5M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-S5-3_U | 3.3M | 2.7M | 81.9% | 2.4M | 72.0% | 0.3M | 119.0bp | 119.5bp | 0.7M | 0.7M | 0.7M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| RNAi-WYS-1_P | 19.6M | 16.7M | 85.3% | 15.7M | 80.3% | 1.0M | 296.0bp | 295.2bp | 14.4M | 14.1M | 14.1M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-WYS-1_U | 3.1M | 2.7M | 85.9% | 2.5M | 79.8% | 0.2M | 120.0bp | 120.1bp | 0.9M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-WYS-2_P | 20.1M | 16.4M | 81.5% | 15.3M | 76.2% | 1.1M | 296.0bp | 294.9bp | 13.8M | 13.5M | 13.6M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-WYS-2_U | 3.4M | 2.8M | 81.8% | 2.5M | 75.6% | 0.2M | 121.0bp | 120.9bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-WYS-3_P | 24.7M | 20.9M | 84.5% | 19.4M | 78.6% | 1.5M | 296.0bp | 295.7bp | 16.7M | 16.3M | 16.4M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-WYS-3_U | 4.8M | 4.1M | 85.2% | 3.8M | 78.5% | 0.3M | 118.0bp | 118.6bp | 1.2M | 1.2M | 1.2M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-gam-1_P | 18.2M | 15.5M | 85.4% | 14.8M | 81.4% | 0.7M | 296.0bp | 295.2bp | 13.7M | 13.4M | 13.5M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.3bp |
| RNAi-gam-1_U | 3.2M | 2.8M | 86.4% | 2.6M | 81.3% | 0.2M | 120.0bp | 120.2bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| RNAi-gam-2_P | 20.6M | 15.9M | 76.8% | 14.9M | 72.0% | 1.0M | 296.0bp | 294.9bp | 12.7M | 12.3M | 12.5M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| RNAi-gam-2_U | 3.8M | 2.9M | 77.5% | 2.7M | 71.9% | 0.2M | 121.0bp | 120.6bp | 0.9M | 0.9M | 0.9M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| RNAi-gam-3_P | 23.6M | 22.5M | 95.2% | 21.6M | 91.3% | 0.9M | 296.0bp | 295.0bp | 18.1M | 17.6M | 17.8M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| RNAi-gam-3_U | 4.1M | 4.0M | 96.2% | 3.7M | 91.0% | 0.2M | 120.0bp | 120.5bp | 1.2M | 1.2M | 1.2M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-S5-1_P | 19.1M | 17.9M | 93.9% | 16.9M | 88.9% | 1.0M | 296.0bp | 295.2bp | 13.9M | 13.6M | 13.6M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-S5-1_U | 4.0M | 3.8M | 94.8% | 3.6M | 88.0% | 0.3M | 119.0bp | 119.7bp | 1.1M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-S5-2_P | 21.4M | 19.9M | 93.2% | 18.7M | 87.4% | 1.2M | 296.0bp | 295.4bp | 15.8M | 15.5M | 15.5M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-S5-2_U | 4.0M | 3.8M | 93.7% | 3.5M | 86.5% | 0.3M | 120.0bp | 120.0bp | 1.1M | 1.1M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-S5-3_P | 20.7M | 18.1M | 87.5% | 16.9M | 81.6% | 1.2M | 296.0bp | 295.5bp | 14.4M | 14.1M | 14.2M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-S5-3_U | 3.2M | 2.8M | 87.3% | 2.5M | 79.8% | 0.2M | 120.0bp | 120.5bp | 0.8M | 0.8M | 0.8M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-WYS-2_P | 18.9M | 18.2M | 96.3% | 17.5M | 92.9% | 0.7M | 296.0bp | 294.9bp | 15.2M | 14.8M | 14.9M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-WYS-2_U | 3.5M | 3.4M | 97.3% | 3.2M | 92.3% | 0.2M | 121.0bp | 120.8bp | 1.1M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-WYS-3_P | 19.2M | 18.4M | 96.0% | 17.7M | 92.4% | 0.7M | 296.0bp | 295.5bp | 15.1M | 14.8M | 14.9M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-WYS-3_U | 3.4M | 3.3M | 96.8% | 3.1M | 91.6% | 0.2M | 118.0bp | 118.3bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-male-gam-1_P | 20.3M | 19.4M | 95.5% | 18.7M | 92.2% | 0.7M | 296.0bp | 295.3bp | 16.8M | 16.3M | 16.5M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-male-gam-1_U | 3.5M | 3.4M | 96.7% | 3.2M | 92.0% | 0.2M | 119.0bp | 119.2bp | 1.1M | 1.0M | 1.1M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-male-gam-2_P | 22.5M | 21.5M | 95.5% | 20.8M | 92.0% | 0.8M | 296.0bp | 295.6bp | 18.4M | 17.8M | 18.0M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-male-gam-2_U | 3.2M | 3.1M | 96.2% | 3.0M | 91.4% | 0.2M | 120.0bp | 120.0bp | 1.0M | 1.0M | 1.0M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-male-gam-3_P | 23.8M | 22.7M | 95.3% | 21.9M | 91.7% | 0.8M | 296.0bp | 295.1bp | 18.3M | 17.6M | 17.9M | 0.3M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-male-gam-3_U | 3.8M | 3.6M | 96.1% | 3.5M | 91.2% | 0.2M | 118.0bp | 118.6bp | 1.1M | 1.0M | 1.1M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.5bp | 0.0% | 1.2bp |
| WT-mature-herm-1_P | 22.0M | 15.2M | 68.9% | 11.0M | 50.1% | 4.1M | 297.0bp | 295.9bp | 8.9M | 8.7M | 8.8M | 0.1M | 0.0M | 0.0M | 0.2% | 0.0% | 1.5bp | 0.0% | 1.4bp |
| WT-mature-herm-1_U | 4.1M | 2.5M | 61.7% | 1.9M | 46.4% | 0.6M | 125.0bp | 124.7bp | 0.6M | 0.6M | 0.6M | 0.0M | 0.0M | 0.0M | 0.3% | 0.0% | 1.4bp | 0.0% | 1.5bp |
| WT-mature-herm-2_P | 19.4M | 14.3M | 73.4% | 12.7M | 65.3% | 1.6M | 296.0bp | 295.2bp | 11.5M | 11.3M | 11.3M | 0.2M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-mature-herm-2_U | 3.1M | 2.3M | 73.3% | 2.0M | 65.1% | 0.3M | 121.0bp | 121.3bp | 0.7M | 0.7M | 0.7M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.2bp |
| WT-mature-herm-3_P | 23.7M | 15.7M | 66.2% | 10.7M | 45.2% | 5.0M | 297.0bp | 295.9bp | 9.3M | 9.1M | 9.1M | 0.2M | 0.0M | 0.0M | 0.1% | 0.0% | 1.5bp | 0.0% | 1.4bp |
| WT-mature-herm-3_U | 5.0M | 2.9M | 58.3% | 2.1M | 41.8% | 0.8M | 123.0bp | 123.7bp | 0.7M | 0.7M | 0.7M | 0.0M | 0.0M | 0.0M | 0.2% | 0.0% | 1.4bp | 0.0% | 1.4bp |